Meta-analysis reveals universal microbiome signatures for colorectal cancer

Using meta-analysis, Selin Pekel and colleagues from the MI-EOCRC project, an international group of researchers from the Netherlands, Germany, and Switzerland, assembled publicly available data from dozens of gut microbiome studies of colorectal cancer, reprocessing raw sequencing data to create a large cross-sectional “snapshot” of microbiomes across the world.

Meta-analysis reveals universal microbiome signatures for colorectal cancer

This approach allowed them to identify broad, population-level patterns of this important tumor disease that would not be identifiable in individual studies.

From this global dataset, they identified a microbiome signature that distinguishes colorectal cancer patients from cancer-free control populations. Thanks to the meta-analysis approach, they observed that this signature is universal across age groups and geographic regions, meaning that cancer patients tend to have similar bacterial genera in their gut. At a finer taxonomic resolution, however, they found that Fusobacterium subspecies display notable geographic variation, suggesting that pathogen strain pools are shaped by local environmental factors.

Being interested in diet as a potential influence on the gut microbiome, they found that in general higher fiber intake is negatively correlated with cancer-associated microbiome profiles, and that fiber supplementation could be useful to steer the gut microbiome away from cancer-associated towards a healthy state.

The lead author of the study, Georg Zeller, summarized: “As the largest single disease meta-analysis in the microbiome field at this point in time, this paper shows the power of open science; the insights we gained would not be easy to glean from single studies.”

The article can be found here.

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